charm AT lists.siebelschool.illinois.edu
Subject: Charm++ parallel programming system
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- From: Shan-ho Tsai <tsai AT hal.physast.uga.edu>
- To: charm AT cs.uiuc.edu
- Subject: [charm] CHARM 6.1.3 - error compiling isomalloc.c
- Date: Mon, 8 Feb 2010 11:58:57 -0500 (EST)
- List-archive: <http://lists.cs.uiuc.edu/pipermail/charm>
- List-id: CHARM parallel programming system <charm.cs.uiuc.edu>
Dear CHARM developers,
I am trying to build CHARM 6.1.3, which is included in
the NAMD 2.7b2 source tarball, on a Linux RHEL4.8 machine
with IB. I compiled it successfully using MVAPICH2 1.2
(built with gcc/g++ 3.4.6). However, now I am trying to
build it using MVAPICH2 1.4 (also built with gcc/g++ 3.4.6)
and I am getting an error in the compilation of
src/conv-core/isomalloc.c
The error is
../bin/charmc -O3 -nobs -c -I. isomalloc.c
isomalloc.c: In function `call_mmap':
isomalloc.c:1526: error: `MAP_ANON' undeclared (first use in this function)
isomalloc.c:1526: error: (Each undeclared identifier is reported only once
isomalloc.c:1526: error: for each function it appears in.)
Fatal Error by charmc in directory /usr/local/NAMD_2.7b2_Source_mvapich2-1.4_gcc/charm-6.1.3/mpi-linux-x86_64/tmp
Command /usr/local/mvapich2-1.4_gcc346/bin/mpicc -m64 -fPIC -I../bin/../include -D__CHARMC__=1 -I. -O3 -I/usr/local/mvapich2-1.4_gcc346/include -c isomalloc.c -o isomalloc.o returned error code 1
charmc exiting...
gmake: *** [isomalloc.o] Error 1
Not sure why I am getting this error now and not when I compiled
with the older version of MVAPICH2. I am a bit puzzled as I am using
the same underlying compiler gcc/g++ 3.4.6 in both cases.
Any suggestions what is causing this error and how I can get it resolved?
Thank you very much.
Shan-Ho Tsai
-----------------------------------------------------------
Shan-Ho Tsai
RCC - University of Georgia, Athens, GA 30602, USA
Phone (706) 542 6222
Email:
shtsai AT uga.edu
- [charm] CHARM 6.1.3 - error compiling isomalloc.c, Shan-ho Tsai, 02/08/2010
- Re: [charm] CHARM 6.1.3 - error compiling isomalloc.c, Gengbin Zheng, 02/16/2010
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