Charm++ parallel programming system

[黄须啟 <huangxuqi14 AT mails.ucas.ac.cn>]

Dear Professor:

        I want to compiling NAMD 2.11 and try the fowlling command:

tar xvf NAMD_2.11_Source.tar.gz

    cd NAMD_2.11_Source

    tar xvf charm-6.7.0.tar

    cd charm-6.7.0

    env MPICXX=mpicxx ./build charm++ mpi-linux-x86_64 --with-production -DMPICH_IGNORE_CXX_SEEK

    cd mpi-linux-x86_64/tests/charm++/megatest

    make pgm

 

then it shows there is something wrong:

 

[xyli@cmohpc megatest]$ make pgm
../../../bin/charmc  -c megatest.ci
../../../bin/charmc  -o megatest.o megatest.C
../../../bin/charmc  -c groupring.ci
../../../bin/charmc  -o groupring.o groupring.C
../../../bin/charmc  -c nodering.ci
../../../bin/charmc  -o nodering.o nodering.C
../../../bin/charmc  -c varsizetest.ci
../../../bin/charmc  -o varsizetest.o varsizetest.C
../../../bin/charmc  -c varsizetest2.ci
../../../bin/charmc  -o varsizetest2.o varsizetest2.C
../../../bin/charmc  -c varraystest.ci
../../../bin/charmc  -o varraystest.o varraystest.C
../../../bin/charmc  -c groupcast.ci
../../../bin/charmc  -o groupcast.o groupcast.C
../../../bin/charmc  -c groupmulti.ci
../../../bin/charmc  -o groupmulti.o groupmulti.C
../../../bin/charmc  -c groupsectiontest.ci
../../../bin/charmc  -o groupsectiontest.o groupsectiontest.C
../../../bin/charmc  -c multisectiontest.ci
../../../bin/charmc  -o multisectiontest.o multisectiontest.C
../../../bin/charmc  -c nodecast.ci
../../../bin/charmc  -o nodecast.o nodecast.C
../../../bin/charmc  -c synctest.ci
../../../bin/charmc  -o synctest.o synctest.C
../../../bin/charmc  -c fib.ci
../../../bin/charmc  -o fib.o fib.C
../../../bin/charmc  -c arrayring.ci
../../../bin/charmc  -o arrayring.o arrayring.C
../../../bin/charmc  -c tempotest.ci
../../../bin/charmc  -o tempotest.o tempotest.C
../../../bin/charmc  -c packtest.ci
../../../bin/charmc  -o packtest.o packtest.C
../../../bin/charmc  -c queens.ci
../../../bin/charmc  -o queens.o queens.C
../../../bin/charmc  -c migration.ci
../../../bin/charmc  -o migration.o migration.C
../../../bin/charmc  -c marshall.ci
../../../bin/charmc  -o marshall.o marshall.C
../../../bin/charmc  -c priomsg.ci
../../../bin/charmc  -o priomsg.o priomsg.C
../../../bin/charmc  -c priotest.ci
../../../bin/charmc  -o priotest.o priotest.C
../../../bin/charmc  -c rotest.ci
../../../bin/charmc  -o rotest.o rotest.C
../../../bin/charmc  -o statistics.o statistics.C
../../../bin/charmc  -c templates.ci
../../../bin/charmc  -o templates.o templates.C
../../../bin/charmc  -c inherit.ci
../../../bin/charmc  -o inherit.o inherit.C
../../../bin/charmc  -c reduction.ci
../../../bin/charmc  -o reduction.o reduction.C
../../../bin/charmc  -c bitvector.ci
../../../bin/charmc  -o bitvector.o bitvector.C
../../../bin/charmc  -c immediatering.ci
../../../bin/charmc  -o immediatering.o immediatering.C
../../../bin/charmc  -c callback.ci
../../../bin/charmc  -o callback.o callback.C
../../../bin/charmc  -c inlineem.ci
../../../bin/charmc  -o inlineem.o inlineem.C
../../../bin/charmc  -c completion_test.ci
../../../bin/charmc  -o completion_test.o completion_test.C
completion_test.C:17: warning: 'auto_ptr' is deprecated (declared at /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/backward/auto_ptr.h:86)
../../../bin/charmc  -o pgm  megatest.o groupring.o nodering.o varsizetest.o varsizetest2.o varraystest.o groupcast.o groupmulti.o groupsectiontest.o multisectiontest.o nodecast.o synctest.o fib.o arrayring.o tempotest.o packtest.o queens.o migration.o marshall.o priomsg.o priotest.o rotest.o statistics.o templates.o inherit.o reduction.o bitvector.o immediatering.o callback.o inlineem.o completion_test.o -language charm++ -module completion

 

    What should I do to solve the problem?

   

    I 'm looking forward to your reply!

    sincerely

    huangxuqi